EnhancerDB
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  3. rs56879415[chr6:137563148]
Enhancers that have rs56879415[chr6:137563148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 137543045 137565455 enh23656
Brain (SK-N-MC) Liver Astrocyte Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56879415[chr6:137563148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 137563142 137563163 IRF1 JASPAR yes 105629411
chr6 137563143 137563164 IRF1 JASPAR yes 105629412
chr6 137563144 137563165 IRF1 JASPAR yes 105629413
chr6 137563145 137563166 IRF1 JASPAR yes 105629414
chr6 137563146 137563161 FOXP1 JASPAR yes 105629415
chr6 137563146 137563167 IRF1 JASPAR yes 105629416
chr6 137563147 137563162 FOXP1 JASPAR yes 105629417
chr6 137563147 137563168 IRF1 JASPAR yes 105629418
chr6 137563148 137563163 FOXP1 JASPAR yes 105629419
chr6 137563148 137563169 IRF1 JASPAR yes 105629420
Genes associated with rs56879415[chr6:137563148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More