EnhancerDB
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  3. rs56886112[chr15:41092200]
Enhancers that have rs56886112[chr15:41092200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56886112[chr15:41092200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41092186 41092206 RREB1 JASPAR yes 22955927
chr15 41092189 41092209 RREB1 JASPAR yes 22955928
chr15 41092190 41092205 IRF9 JASPAR yes 22955929
chr15 41092194 41092214 RREB1 JASPAR yes 22955930
chr15 41092197 41092217 RREB1 JASPAR yes 22955931
chr15 41092198 41092204 TCF4 TRANSFAC yes 22955932
chr15 41092200 41092220 RREB1 JASPAR yes 22955933
Genes associated with rs56886112[chr15:41092200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More