EnhancerDB
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  3. rs568938431[chr17:34235828]
Enhancers that have rs568938431[chr17:34235828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs568938431[chr17:34235828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34234940 34236229 ZBTB33 GTRD no Brain (SK-N-SH) 21751136
chr17 34235152 34236324 ZNF143 GTRD no Epithelial (MCF-7) 21751137
chr17 34235236 34236027 ZNF143 GTRD no Epithelial (MCF-7) 21751138
chr17 34235269 34236072 ZNF143 GTRD no Epithelial (MCF-7) 21751139
chr17 34235272 34236117 ZNF143 GTRD no Epithelial (MCF-7) 21751140
chr17 34235288 34235918 SOX2 GTRD no Neural Stem Cells (H9) 21751141
chr17 34235290 34236220 ZNF143 GTRD no Epithelial (MCF-7) 21751142
chr17 34235297 34236034 ZBTB33 GTRD no Brain (SK-N-SH) 21751143
chr17 34235302 34236051 ZNF143 GTRD no Epithelial (MCF-7) 21751144
chr17 34235327 34236091 ZBTB33 GTRD no Brain (SK-N-SH) 21751145
chr17 34235348 34236083 ZBTB33 GTRD no Brain (SK-N-SH) 21751146
chr17 34235370 34236042 ZNF143 GTRD no Epithelial (MCF-7) 21751147
chr17 34235391 34236088 ZNF143 GTRD no Epithelial (MCF-7) 21751148
chr17 34235440 34235958 ZBTB33 GTRD no Brain (SK-N-SH) 21751150
chr17 34235443 34236251 ZNF143 GTRD no Epithelial (MCF-7) 21751151
chr17 34235474 34235920 ZNF143 GTRD no Epithelial (MCF-7) 21751153
chr17 34235479 34236949 TEF1 GTRD no Bone (Osteoblast) 21751154
chr17 34235484 34235913 ZNF274 GTRD no Blood (GM12878) 21751155
chr17 34235488 34235862 SOX2 GTRD no Neural Stem Cells (H9) 21751156
chr17 34235511 34236057 ZNF143 GTRD no Epithelial (MCF-7) 21751158
chr17 34235584 34235933 ZBTB33 GTRD no Brain (SK-N-SH) 21751160
chr17 34235585 34235829 ZNF274 GTRD no Blood (GM12878) 21751161
chr17 34235819 34235828 SOX9 JASPAR yes 54021732
Genes associated with rs568938431[chr17:34235828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More