EnhancerDB
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  3. rs568942421[chr1:185613868]
Enhancers that have rs568942421[chr1:185613868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs568942421[chr1:185613868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185613725 185614065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359403
chr1 185613771 185614101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359404
chr1 185613774 185614030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359405
chr1 185613774 185614038 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359406
chr1 185613814 185613968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359407
chr1 185613850 185613870 RREB1 JASPAR yes 33829857
chr1 185613851 185613871 RREB1 JASPAR yes 33829858
chr1 185613853 185613873 RREB1 JASPAR yes 33829859
chr1 185613854 185613874 RREB1 JASPAR yes 33829860
chr1 185613856 185613868 ZBTB7A JASPAR yes 33829863
chr1 185613856 185613876 RREB1 JASPAR yes 33829864
chr1 185613857 185613871 PLAG1 JASPAR yes 33829865
chr1 185613857 185613877 RREB1 JASPAR yes 33829866
chr1 185613858 185613873 RUNX2 JASPAR yes 33829867
chr1 185613858 185613878 RREB1 JASPAR yes 33829868
chr1 185613860 185613880 RREB1 JASPAR yes 33829869
chr1 185613861 185613881 RREB1 JASPAR yes 33829870
chr1 185613862 185613882 RREB1 JASPAR yes 33829871
chr1 185613866 185613876 SP1 JASPAR yes 33829872
Genes associated with rs568942421[chr1:185613868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More