EnhancerDB
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  3. rs568972120[chr1:223901187]
Enhancers that have rs568972120[chr1:223901187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568972120[chr1:223901187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223899892 223901978 POLR2A UCSC Txn Factor no Conserved 107873036
chr1 223901020 223901536 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383857
chr1 223901020 223901536 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873037
chr1 223901045 223901369 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383858
chr1 223901045 223901369 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873038
chr1 223901048 223901578 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383859
chr1 223901048 223901578 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873039
chr1 223901183 223901194 E2F4 JASPAR yes 35671296
chr1 223901183 223901194 E2F6 JASPAR yes 35671297
chr1 223901184 223901189 SP1 TRANSFAC yes 35671298
chr1 223901184 223901734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383860
chr1 223901184 223901734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873040
chr1 223901186 223901199 NFKB2 JASPAR yes 35671299
Genes associated with rs568972120[chr1:223901187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More