EnhancerDB
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  3. rs569188099[chr12:50971331]
Enhancers that have rs569188099[chr12:50971331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50954380 50971535 enh2347
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569188099[chr12:50971331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50971320 50971335 FOXP1 JASPAR yes 120846480
chr12 50971320 50971341 IRF1 JASPAR yes 120846481
chr12 50971322 50971334 FOXC2 JASPAR yes 120846483
chr12 50971324 50971339 FOXP1 JASPAR yes 120846484
chr12 50971324 50971345 IRF1 JASPAR yes 120846485
chr12 50971330 50971336 TBP TRANSFAC yes 120846486
chr12 50971330 50971351 IRF1 JASPAR yes 120846487
Genes associated with rs569188099[chr12:50971331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More