EnhancerDB
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  3. rs569215366[chr18:56206156]
Enhancers that have rs569215366[chr18:56206156]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56204885 56211735 enh4869
Liver Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs569215366[chr18:56206156]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56201636 56207333 POLR2A UCSC Txn Factor no Conserved 108338393
chr18 56205684 56207229 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824162
chr18 56205684 56207229 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338394
chr18 56206155 56206159 NFE TRANSFAC yes 110956564
chr18 56206155 56206160 GATA1 TRANSFAC yes 110956565
chr18 56206155 56206161 GATA3 JASPAR yes 110956566
Genes associated with rs569215366[chr18:56206156], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More