EnhancerDB
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  3. rs569565278[chr12:116892090]
Enhancers that have rs569565278[chr12:116892090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs569565278[chr12:116892090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116891546 116893536 ZNF143 GTRD no Epithelial (MCF-7) 108061659
chr12 116892084 116892095 ESRRA JASPAR yes 123997314
chr12 116892084 116892095 ESRRB JASPAR yes 123997315
chr12 116892084 116892097 NR2F1 JASPAR yes 123997316
chr12 116892086 116892094 NR4A2 JASPAR yes 123997317
chr12 116892088 116892092 ESR1 TRANSFAC yes 123997318
Genes associated with rs569565278[chr12:116892090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More