EnhancerDB
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  3. rs569679090[chr19:13268256]
Enhancers that have rs569679090[chr19:13268256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569679090[chr19:13268256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388799
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388800
chr19 13260320 13268266 POLR2A UCSC Txn Factor no Conserved 108388801
chr19 13267902 13268279 ZNF274 GTRD no Liver (HepG2) 21850847
chr19 13267902 13268279 ZNF274 GTRD no Liver (HepG2) 108389173
chr19 13267903 13268324 ZNF274 GTRD no Liver (HepG2) 21850848
chr19 13267903 13268324 ZNF274 GTRD no Liver (HepG2) 108389174
chr19 13267912 13268271 ZNF274 GTRD no Liver (HepG2) 21850849
chr19 13267912 13268271 ZNF274 GTRD no Liver (HepG2) 108389175
chr19 13267912 13268429 ZNF274 GTRD no Liver (HepG2) 21850850
chr19 13267912 13268429 ZNF274 GTRD no Liver (HepG2) 108389176
chr19 13267938 13268356 ZNF274 GTRD no Liver (HepG2) 21850851
chr19 13267938 13268356 ZNF274 GTRD no Liver (HepG2) 108389177
chr19 13267944 13268302 ZNF143 GTRD no Epithelial (MCF-7) 21850852
chr19 13267944 13268302 ZNF143 GTRD no Epithelial (MCF-7) 108389179
chr19 13267984 13268443 ZNF274 GTRD no Bone Marrow (K562) 21850853
chr19 13267984 13268443 ZNF274 GTRD no Bone Marrow (K562) 108389181
chr19 13267990 13268321 ZNF143 GTRD no Epithelial (MCF-7) 21850854
chr19 13267990 13268321 ZNF143 GTRD no Epithelial (MCF-7) 108389182
chr19 13267996 13268464 ZNF274 GTRD no Bone Marrow (K562) 21850855
chr19 13267996 13268464 ZNF274 GTRD no Bone Marrow (K562) 108389183
chr19 13267996 13268531 ZNF274 GTRD no Bone Marrow (K562) 21850856
chr19 13267996 13268531 ZNF274 GTRD no Bone Marrow (K562) 108389184
chr19 13268006 13268384 ZNF274 GTRD no Bone Marrow (K562) 21850857
chr19 13268006 13268384 ZNF274 GTRD no Bone Marrow (K562) 108389185
chr19 13268128 13268463 ZNF274 GTRD no Bone Marrow (K562) 21850858
chr19 13268128 13268463 ZNF274 GTRD no Bone Marrow (K562) 108389187
chr19 13268132 13268431 ZNF274 GTRD no Bone Marrow (K562) 21850859
chr19 13268132 13268431 ZNF274 GTRD no Bone Marrow (K562) 108389188
chr19 13268236 13268257 IRF1 JASPAR yes 112513156
chr19 13268238 13268259 IRF1 JASPAR yes 112513157
chr19 13268241 13268452 ZNF274 GTRD no Bone Marrow (K562) 21850860
chr19 13268242 13268263 IRF1 JASPAR yes 112513158
chr19 13268243 13268264 ZNF263 JASPAR yes 112513159
chr19 13268244 13268259 PRDM1 JASPAR yes 112513160
chr19 13268244 13268259 STAT2 JASPAR yes 112513161
chr19 13268244 13268265 IRF1 JASPAR yes 112513162
chr19 13268245 13268259 SPIC JASPAR yes 112513163
chr19 13268245 13268259 STAT1 JASPAR yes 112513164
chr19 13268246 13268267 ZNF263 JASPAR yes 112513165
chr19 13268248 13268269 IRF1 JASPAR yes 112513166
chr19 13268249 13268270 ZNF263 JASPAR yes 112513167
chr19 13268250 13268265 PRDM1 JASPAR yes 112513168
chr19 13268250 13268265 STAT2 JASPAR yes 112513169
chr19 13268252 13268273 ZNF263 JASPAR yes 112513170
chr19 13268254 13268275 IRF1 JASPAR yes 112513171
chr19 13268255 13268276 ZNF263 JASPAR yes 112513172
chr19 13268256 13268271 STAT2 JASPAR yes 112513173
Genes associated with rs569679090[chr19:13268256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More