EnhancerDB
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  3. rs569778305[chr1:16489049]
Enhancers that have rs569778305[chr1:16489049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 16489021 16489207 vista522
VISTA
Transcript factors that have rs569778305[chr1:16489049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16488711 16489231 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107802223
chr1 16489041 16489054 TFAP2A JASPAR yes 27029438
chr1 16489041 16489054 TFAP2B JASPAR yes 27029439
chr1 16489041 16489054 TFAP2C JASPAR yes 27029440
chr1 16489041 16489054 TFAP2A JASPAR yes 118238724
chr1 16489041 16489054 TFAP2B JASPAR yes 118238725
chr1 16489041 16489054 TFAP2C JASPAR yes 118238726
chr1 16489041 16489056 TFAP2A JASPAR yes 27029441
chr1 16489041 16489056 ZBTB33 JASPAR yes 27029442
chr1 16489041 16489056 TFAP2A JASPAR yes 118238727
chr1 16489041 16489056 ZBTB33 JASPAR yes 118238728
chr1 16489042 16489051 TFAP2A JASPAR yes 27029443
chr1 16489042 16489051 TFAP2A JASPAR yes 118238729
chr1 16489048 16489053 SP1 TRANSFAC yes 27029444
chr1 16489048 16489053 SP1 TRANSFAC yes 118238730
Genes associated with rs569778305[chr1:16489049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More