EnhancerDB
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  3. rs569865626[chr19:2549402]
Enhancers that have rs569865626[chr19:2549402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569865626[chr19:2549402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2549112 2549647 TCF7L2 GTRD no Colon (HCT116) 21837092
chr19 2549112 2549647 TCF7L2 GTRD no Colon (HCT116) 108362401
Genes associated with rs569865626[chr19:2549402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More