EnhancerDB
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  3. rs56988215[chr5:78039753]
Enhancers that have rs56988215[chr5:78039753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs56988215[chr5:78039753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78039745 78039754 HIC2 JASPAR yes 63620328
chr5 78039749 78039759 ID4 JASPAR yes 63620330
chr5 78039749 78039759 TCF3 JASPAR yes 63620331
chr5 78039749 78039759 TCF4 JASPAR yes 63620332
chr5 78039750 78039759 SNAI2 JASPAR yes 63620333
chr5 78039751 78039756 USF2 TRANSFAC yes 63620334
Genes associated with rs56988215[chr5:78039753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More