EnhancerDB
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Enhancers that have rs569887668[chr1:218642164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs569887668[chr1:218642164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218641405 218643036 TEF1 GTRD no Bone (Osteoblast) 21380784
chr1 218641405 218643036 TEF1 GTRD no Bone (Osteoblast) 107870343
chr1 218641938 218642595 ZNF143 GTRD no Epithelial (MCF-7) 21380785
chr1 218641938 218642595 ZNF143 GTRD no Epithelial (MCF-7) 107870344
chr1 218641966 218642350 ZNF274 GTRD no Cervix (HeLa-S3) 21380786
chr1 218641966 218642350 ZNF274 GTRD no Cervix (HeLa-S3) 107870345
chr1 218641971 218642291 ZNF274 GTRD no Liver (HepG2) 107870346
chr1 218641984 218643664 ZNF143 GTRD no Epithelial (MCF-7) 21380787
chr1 218641984 218643664 ZNF143 GTRD no Epithelial (MCF-7) 107870347
chr1 218641999 218642437 ZBTB33 GTRD no Lung (A549) 107870348
chr1 218642158 218642168 POU6F2 JASPAR yes 35382841
chr1 218642159 218642169 EVX1 JASPAR yes 35382843
chr1 218642159 218642169 MEOX2 JASPAR yes 35382844
chr1 218642162 218642166 YY1 TRANSFAC yes 35382845
chr1 218642162 218643198 ZNF143 GTRD no Epithelial (MCF-7) 21380788
chr1 218642162 218643198 ZNF143 GTRD no Epithelial (MCF-7) 107870349
Genes associated with rs569887668[chr1:218642164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More