EnhancerDB
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  3. rs569960860[chr3:56955099]
Enhancers that have rs569960860[chr3:56955099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs569960860[chr3:56955099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56955081 56955102 IRF1 JASPAR yes 2611398
chr3 56955082 56955103 IRF1 JASPAR yes 2611400
chr3 56955083 56955104 IRF1 JASPAR yes 2611402
chr3 56955084 56955099 FOXP1 JASPAR yes 2611403
chr3 56955084 56955105 IRF1 JASPAR yes 2611404
chr3 56955085 56955100 FOXP1 JASPAR yes 2611405
chr3 56955085 56955106 IRF1 JASPAR yes 2611406
chr3 56955086 56955101 FOXP1 JASPAR yes 2611407
chr3 56955086 56955107 IRF1 JASPAR yes 2611408
chr3 56955087 56955102 FOXP1 JASPAR yes 2611409
chr3 56955087 56955108 IRF1 JASPAR yes 2611410
chr3 56955088 56955103 FOXP1 JASPAR yes 2611411
chr3 56955089 56955104 FOXP1 JASPAR yes 2611412
chr3 56955089 56955110 IRF1 JASPAR yes 2611413
chr3 56955090 56955105 FOXP1 JASPAR yes 2611414
chr3 56955090 56955111 IRF1 JASPAR yes 2611415
chr3 56955091 56955106 FOXP1 JASPAR yes 2611416
chr3 56955094 56955109 STAT2 JASPAR yes 2611417
Genes associated with rs569960860[chr3:56955099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More