EnhancerDB
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  3. rs570078366[chr19:6089545]
Enhancers that have rs570078366[chr19:6089545]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570078366[chr19:6089545]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6089534 6089552 RARA JASPAR yes 112255688
chr19 6089536 6089550 RORA JASPAR yes 112255689
chr19 6089536 6089551 JUND JASPAR yes 112255690
chr19 6089537 6089550 DUXA JASPAR yes 112255691
chr19 6089537 6089550 JUN JASPAR yes 112255692
chr19 6089538 6089549 DUX4 JASPAR yes 112255693
chr19 6089543 6089560 RARA JASPAR yes 112255694
chr19 6089543 6089560 RXRA JASPAR yes 112255695
chr19 6089544 6089548 ESR1 TRANSFAC yes 112255696
Genes associated with rs570078366[chr19:6089545], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More