EnhancerDB
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  3. rs570087968[chr12:65012406]
Enhancers that have rs570087968[chr12:65012406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs570087968[chr12:65012406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65012400 65012421 IRF1 JASPAR yes 121416253
chr12 65012404 65012416 IRF1 JASPAR yes 121416254
chr12 65012405 65012425 RREB1 JASPAR yes 121416255
chr12 65012405 65012426 IRF1 JASPAR yes 121416256
chr12 65012406 65012412 TCF4 TRANSFAC yes 121416257
chr12 65012406 65012421 FOXP1 JASPAR yes 121416258
chr12 65012406 65012427 IRF1 JASPAR yes 121416259
Genes associated with rs570087968[chr12:65012406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More