EnhancerDB
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  3. rs570190949[chr12:53759508]
Enhancers that have rs570190949[chr12:53759508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs570190949[chr12:53759508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53759045 53759695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549251
chr12 53759198 53759522 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549254
chr12 53759245 53759718 ZNF143 GTRD no Epithelial (MCF-7) 21549255
chr12 53759494 53759918 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549257
chr12 53759504 53759525 IRF1 JASPAR yes 120982623
chr12 53759504 53759944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549258
chr12 53759505 53759526 IRF1 JASPAR yes 120982624
chr12 53759506 53759527 IRF1 JASPAR yes 120982625
chr12 53759507 53759528 IRF1 JASPAR yes 120982626
chr12 53759508 53759512 YY1 TRANSFAC yes 120982627
chr12 53759508 53759529 IRF1 JASPAR yes 120982628
Genes associated with rs570190949[chr12:53759508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More