EnhancerDB
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  3. rs570405602[chr17:39012000]
Enhancers that have rs570405602[chr17:39012000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39001145 39015955 enh17144
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs570405602[chr17:39012000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39011920 39012186 SOX2 GTRD no Neural Stem Cells (H9) 21756992
chr17 39011964 39012988 ZBTB33 GTRD no Lung (A549) 108257905
chr17 39011983 39012890 ZBTB33 GTRD no Lung (A549) 108257906
chr17 39011992 39012774 ZNF274 GTRD no Liver (HepG2) 108257907
Genes associated with rs570405602[chr17:39012000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More