EnhancerDB
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  3. rs570535995[chr1:230203848]
Enhancers that have rs570535995[chr1:230203848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 230203814 230204638 vista5485
VISTA
Transcript factors that have rs570535995[chr1:230203848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230203498 230203954 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878278
chr1 230203628 230204048 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391233
chr1 230203628 230204048 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878279
chr1 230203638 230203988 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878280
chr1 230203702 230204066 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878281
chr1 230203738 230204285 ZNF263 UCSC Txn Factor no Conserved 107878282
chr1 230203761 230204197 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878283
chr1 230203761 230204377 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878284
chr1 230203767 230204154 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878285
chr1 230203800 230204280 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878286
chr1 230203841 230203851 ELK1 JASPAR yes 36017828
chr1 230203841 230203851 ELK1 JASPAR yes 118477220
chr1 230203844 230204278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878287
Genes associated with rs570535995[chr1:230203848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More