EnhancerDB
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  3. rs570546179[chr12:65023526]
Enhancers that have rs570546179[chr12:65023526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs570546179[chr12:65023526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65023515 65023528 NFKB1 JASPAR yes 121418093
chr12 65023520 65023531 USF1 JASPAR yes 121418095
chr12 65023520 65023531 USF2 JASPAR yes 121418096
chr12 65023521 65023531 SREBF2 JASPAR yes 121418097
chr12 65023523 65023528 USF2 TRANSFAC yes 121418098
chr12 65023526 65023539 NR2F1 JASPAR yes 121418099
Genes associated with rs570546179[chr12:65023526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More