EnhancerDB
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  3. rs570630220[chr16:87820056]
Enhancers that have rs570630220[chr16:87820056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs570630220[chr16:87820056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87819271 87820363 TCF7L2 GTRD no Colon (HCT116) 21734478
chr16 87819299 87820474 ZNF143 GTRD no Epithelial (MCF-7) 21734479
chr16 87819316 87820447 TCF7L2 GTRD no Colon (HCT116) 21734480
chr16 87819368 87820352 TCF7L2 GTRD no Colon (HCT116) 21734481
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220354
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220355
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220356
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220357
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220358
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220359
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220360
chr16 87819926 87820378 ZNF274 GTRD no Liver (HepG2) 21734482
chr16 87819988 87820320 ZNF274 GTRD no Liver (HepG2) 21734483
chr16 87820051 87820276 ZNF274 GTRD no Bone Marrow (K562) 21734484
chr16 87820052 87820067 FOXP1 JASPAR yes 12239283
chr16 87820053 87820068 FOXP1 JASPAR yes 12239284
chr16 87820054 87820069 FOXP1 JASPAR yes 12239285
chr16 87820054 87820075 IRF1 JASPAR yes 12239286
chr16 87820055 87820070 FOXP1 JASPAR yes 12239287
chr16 87820055 87820076 IRF1 JASPAR yes 12239288
chr16 87820056 87820071 FOXP1 JASPAR yes 12239289
chr16 87820056 87820077 IRF1 JASPAR yes 12239290
Genes associated with rs570630220[chr16:87820056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More