EnhancerDB
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  3. rs570729050[chr1:52019227]
Enhancers that have rs570729050[chr1:52019227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs570729050[chr1:52019227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52019209 52019230 IRF1 JASPAR yes 28849724
chr1 52019213 52019234 IRF1 JASPAR yes 28849725
chr1 52019214 52019229 FOXP1 JASPAR yes 28849726
chr1 52019217 52019231 STAT1 JASPAR yes 28849727
chr1 52019217 52019232 PRDM1 JASPAR yes 28849728
chr1 52019217 52019232 STAT2 JASPAR yes 28849729
chr1 52019224 52019239 JUND JASPAR yes 28849730
Genes associated with rs570729050[chr1:52019227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More