EnhancerDB
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  3. rs570876521[chr1:19273138]
Enhancers that have rs570876521[chr1:19273138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570876521[chr1:19273138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19271677 19273824 TCF7L2 GTRD no Colon (HCT116) 107802286
chr1 19273128 19273146 RARA JASPAR yes 27164774
chr1 19273135 19273148 NR2F1 JASPAR yes 27164775
chr1 19273137 19273152 JUND JASPAR yes 27164776
chr1 19273138 19273151 JUN JASPAR yes 27164777
Genes associated with rs570876521[chr1:19273138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More