EnhancerDB
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  3. rs570975548[chr17:62690639]
Enhancers that have rs570975548[chr17:62690639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570975548[chr17:62690639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62687737 62691399 ZNF143 GTRD no Epithelial (MCF-7) 21778957
chr17 62687749 62691357 TCF7L2 GTRD no Colon (HCT116) 21778958
chr17 62687783 62691374 ZNF143 GTRD no Epithelial (MCF-7) 21778959
chr17 62687797 62691593 ZNF143 GTRD no Epithelial (MCF-7) 21778960
chr17 62687810 62695569 ZNF143 GTRD no Epithelial (MCF-7) 21778961
chr17 62687873 62694535 ZNF143 GTRD no Epithelial (MCF-7) 21778963
chr17 62687878 62695454 ZNF143 GTRD no Epithelial (MCF-7) 21778964
chr17 62687993 62695445 ZNF143 GTRD no Epithelial (MCF-7) 21778965
chr17 62688394 62691502 TCF7L2 GTRD no Colon (HCT116) 21778973
chr17 62688476 62690874 TCF7L2 GTRD no Colon (HCT116) 21778975
chr17 62689369 62691317 TCF7L2 GTRD no Colon (HCT116) 21778980
chr17 62689440 62691294 TCF7L2 GTRD no Colon (HCT116) 21778982
chr17 62689456 62691341 ZNF143 GTRD no Epithelial (MCF-7) 21778983
chr17 62689583 62690707 ZNF274 GTRD no Bone Marrow (K562) 21778986
chr17 62689644 62691644 ZNF143 GTRD no Epithelial (MCF-7) 21778987
chr17 62689960 62695593 ZNF143 GTRD no Epithelial (MCF-7) 21778989
chr17 62689962 62690690 ZNF143 GTRD no Epithelial (MCF-7) 21778990
chr17 62690004 62690664 ZNF274 GTRD no Cervix (HeLa-S3) 21778991
chr17 62690015 62690664 ZNF143 GTRD no Epithelial (MCF-7) 21778992
chr17 62690107 62690765 ZNF274 GTRD no Bone Marrow (K562) 21778994
chr17 62690150 62690766 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21778998
chr17 62690222 62690826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779005
chr17 62690238 62690768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779006
chr17 62690241 62690757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779007
chr17 62690264 62690914 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779008
chr17 62690281 62690825 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779009
chr17 62690304 62690808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779010
chr17 62690324 62690694 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779011
chr17 62690335 62690679 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779013
chr17 62690338 62690668 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779014
chr17 62690343 62690673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779016
chr17 62690364 62690648 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21779017
chr17 62690365 62690655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779018
chr17 62690367 62690707 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779019
chr17 62690367 62690743 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779020
chr17 62690367 62690747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779021
chr17 62690375 62690655 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21779023
chr17 62690375 62690715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779024
chr17 62690381 62690681 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779025
chr17 62690382 62690672 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779026
chr17 62690390 62691000 ZNF274 GTRD no Bone Marrow (K562) 21779027
chr17 62690396 62690732 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779028
chr17 62690397 62690667 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779029
chr17 62690401 62690681 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779030
chr17 62690409 62690644 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779031
chr17 62690410 62690886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779032
chr17 62690412 62690788 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779033
chr17 62690428 62690688 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779035
chr17 62690437 62690661 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779038
chr17 62690622 62690643 IRF1 JASPAR yes 55312593
chr17 62690624 62690639 STAT2 JASPAR yes 55312594
chr17 62690625 62690639 STAT1 JASPAR yes 55312595
chr17 62690626 62690641 IRF9 JASPAR yes 55312597
Genes associated with rs570975548[chr17:62690639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More