EnhancerDB
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  3. rs570978873[chr2:38374175]
Enhancers that have rs570978873[chr2:38374175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38370585 38382295 enh18455
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr2 38373682 38374230 vista31090
VISTA
Transcript factors that have rs570978873[chr2:38374175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38373797 38374436 NFIC UCSC Txn Factor no Conserved 108431886
chr2 38374027 38374382 RUNX3 UCSC Txn Factor no Conserved 108431887
chr2 38374039 38374357 ATF2 UCSC Txn Factor no Conserved 108431888
chr2 38374073 38374338 BATF UCSC Txn Factor no Conserved 108431889
chr2 38374090 38374332 IRF4 UCSC Txn Factor no Conserved 108431890
chr2 38374165 38374185 ESR1 JASPAR yes 22037169
chr2 38374165 38374185 ESR1 JASPAR yes 73113935
chr2 38374168 38374185 RXRA JASPAR yes 22037170
chr2 38374168 38374185 RXRA JASPAR yes 73113936
chr2 38374169 38374187 ESR2 JASPAR yes 22037171
chr2 38374169 38374187 ESR2 JASPAR yes 73113937
chr2 38374170 38374185 ESR2 JASPAR yes 22037172
chr2 38374170 38374185 ESR2 JASPAR yes 73113938
chr2 38374172 38374186 RXRB JASPAR yes 22037173
chr2 38374172 38374186 RXRG JASPAR yes 22037174
chr2 38374172 38374186 RXRB JASPAR yes 73113939
chr2 38374172 38374186 RXRG JASPAR yes 73113940
chr2 38374172 38374187 NR2C2 JASPAR yes 22037175
chr2 38374172 38374187 NR2C2 JASPAR yes 73113941
chr2 38374175 38374188 NR2F1 JASPAR yes 22037176
chr2 38374175 38374188 NR2F1 JASPAR yes 73113942
Genes associated with rs570978873[chr2:38374175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More