EnhancerDB
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Enhancers that have rs57101652[chr19:2558248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs57101652[chr19:2558248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2558230 2558250 RREB1 JASPAR yes 112074609
chr19 2558230 2558251 IRF1 JASPAR yes 112074610
chr19 2558231 2558252 IRF1 JASPAR yes 112074613
chr19 2558235 2558249 IRF7 JASPAR yes 112074616
chr19 2558236 2558256 RREB1 JASPAR yes 112074617
chr19 2558236 2558257 IRF1 JASPAR yes 112074618
chr19 2558237 2558252 FOXP1 JASPAR yes 112074620
chr19 2558237 2558258 IRF1 JASPAR yes 112074621
chr19 2558238 2558253 STAT2 JASPAR yes 112074622
chr19 2558241 2558253 IRF1 JASPAR yes 112074623
chr19 2558242 2558263 IRF1 JASPAR yes 112074624
chr19 2558243 2558249 TCF4 TRANSFAC yes 112074625
chr19 2558243 2558258 FOXP1 JASPAR yes 112074626
chr19 2558244 2558255 FOXP2 JASPAR yes 112074627
chr19 2558244 2558256 FOXC2 JASPAR yes 112074628
Genes associated with rs57101652[chr19:2558248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More