EnhancerDB
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  3. rs571027963[chr11:116722454]
Enhancers that have rs571027963[chr11:116722454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 116719892 116728215 enh29178
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
chr11 116722234 116722744 vista11673
VISTA
Transcript factors that have rs571027963[chr11:116722454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 116722393 116722669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21516035
chr11 116722393 116722669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108000042
chr11 116722419 116722625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21516036
chr11 116722419 116722625 EBF1 UCSC Txn Factor no Conserved 108000043
chr11 116722419 116722625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108000044
chr11 116722441 116722616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21516037
chr11 116722441 116722616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108000045
chr11 116722447 116722457 GSC2 JASPAR yes 41692430
chr11 116722447 116722457 GSC JASPAR yes 41692431
chr11 116722447 116722457 GSC2 JASPAR yes 114135849
chr11 116722447 116722457 GSC JASPAR yes 114135850
chr11 116722448 116722456 OTX1 JASPAR yes 41692432
chr11 116722448 116722456 OTX1 JASPAR yes 114135851
chr11 116722448 116722457 PITX3 JASPAR yes 41692433
chr11 116722448 116722457 PITX3 JASPAR yes 114135852
Genes associated with rs571027963[chr11:116722454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More