EnhancerDB
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  3. rs571073005[chr1:204254553]
Enhancers that have rs571073005[chr1:204254553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571073005[chr1:204254553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 21370352
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 107859792
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 107859793
chr1 204253650 204255004 ZNF274 GTRD no Liver (HepG2) 21370353
chr1 204253650 204255004 ZNF274 GTRD no Liver (HepG2) 107859794
chr1 204253704 204255221 AR GTRD no Prostate (PC-3) 21370354
chr1 204253704 204255221 AR GTRD no Prostate (PC-3) 107859795
chr1 204253875 204255030 TEF1 GTRD no Bone (Osteoblast) 21370355
chr1 204253875 204255030 TEF1 GTRD no Bone (Osteoblast) 107859796
chr1 204253876 204255019 ZNF143 GTRD no Epithelial (MCF-7) 21370356
chr1 204253876 204255019 ZNF143 GTRD no Epithelial (MCF-7) 107859797
chr1 204254539 204254554 STAT2 JASPAR yes 34688140
chr1 204254540 204254554 STAT1 JASPAR yes 34688141
chr1 204254540 204254560 RREB1 JASPAR yes 34688142
chr1 204254541 204254553 IRF1 JASPAR yes 34688143
chr1 204254541 204254555 IRF7 JASPAR yes 34688144
chr1 204254548 204254568 RREB1 JASPAR yes 34688145
chr1 204254551 204254571 RREB1 JASPAR yes 34688146
Genes associated with rs571073005[chr1:204254553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More