EnhancerDB
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  3. rs571113353[chr17:49036791]
Enhancers that have rs571113353[chr17:49036791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs571113353[chr17:49036791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49035273 49036846 ZNF143 GTRD no Epithelial (MCF-7) 21771885
chr17 49035317 49037099 ZNF143 GTRD no Epithelial (MCF-7) 21771891
chr17 49035418 49036945 ZNF143 GTRD no Epithelial (MCF-7) 21771903
chr17 49036773 49036794 IRF1 JASPAR yes 54739391
chr17 49036782 49036796 GATA2 JASPAR yes 54739394
chr17 49036785 49036796 HOXA10 JASPAR yes 54739395
Genes associated with rs571113353[chr17:49036791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More