EnhancerDB
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  3. rs571229542[chr2:26283953]
Enhancers that have rs571229542[chr2:26283953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs571229542[chr2:26283953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26283943 26283958 LEF1 JASPAR yes 72520421
chr2 26283953 26283974 IRF1 JASPAR yes 72520423
Genes associated with rs571229542[chr2:26283953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More