EnhancerDB
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  3. rs571250904[chr17:38720543]
Enhancers that have rs571250904[chr17:38720543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571250904[chr17:38720543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 21756198
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 108256789
chr17 38718282 38720793 TCF7L2 GTRD no Colon (HCT116) 108256790
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 21756200
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 108256792
chr17 38718290 38720827 ZNF274 GTRD no Bone Marrow (K562) 108256793
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 21756226
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 108256833
chr17 38718479 38720989 TCF7L2 GTRD no Colon (HCT116) 108256834
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 21756251
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 108256869
chr17 38719027 38721193 ZNF274 GTRD no Bone Marrow (K562) 108256870
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 21756254
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 108256875
chr17 38719045 38721101 ZNF274 GTRD no Bone Marrow (K562) 108256876
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 21756260
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 108256886
chr17 38719129 38720943 TCF7L2 GTRD no Colon (HCT116) 108256887
chr17 38719190 38720977 TCF7L2 GTRD no Colon (HCT116) 21756263
chr17 38719190 38720977 TCF7L2 GTRD no Colon (HCT116) 108256890
chr17 38719193 38720907 TCF7L2 GTRD no Colon (HCT116) 21756264
chr17 38719193 38720907 TCF7L2 GTRD no Colon (HCT116) 108256891
chr17 38719222 38720603 ZNF274 GTRD no Bone Marrow (K562) 21756266
chr17 38719222 38720603 ZNF274 GTRD no Bone Marrow (K562) 108256893
chr17 38719227 38720907 TCF7L2 GTRD no Colon (HCT116) 21756267
chr17 38719227 38720907 TCF7L2 GTRD no Colon (HCT116) 108256894
chr17 38719299 38720718 TCF7L2 GTRD no Colon (HCT116) 21756270
chr17 38719299 38720718 TCF7L2 GTRD no Colon (HCT116) 108256897
chr17 38719322 38720868 TCF7L2 GTRD no Colon (HCT116) 21756273
chr17 38719322 38720868 TCF7L2 GTRD no Colon (HCT116) 108256900
chr17 38719504 38721238 ZNF274 GTRD no Bone Marrow (K562) 21756279
chr17 38719504 38721238 ZNF274 GTRD no Bone Marrow (K562) 108256906
chr17 38719555 38720625 ZNF274 GTRD no Bone Marrow (K562) 21756280
chr17 38719555 38720625 ZNF274 GTRD no Bone Marrow (K562) 108256907
chr17 38719675 38720655 ZNF274 GTRD no Bone Marrow (K562) 21756288
chr17 38719675 38720655 ZNF274 GTRD no Bone Marrow (K562) 108256916
chr17 38719702 38720740 ZNF274 GTRD no Bone Marrow (K562) 21756293
chr17 38719702 38720740 ZNF274 GTRD no Bone Marrow (K562) 108256921
chr17 38719811 38720737 TCF7L2 GTRD no Colon (HCT116) 21756300
chr17 38719811 38720737 TCF7L2 GTRD no Colon (HCT116) 108256928
chr17 38720537 38720547 SP1 JASPAR yes 54226975
chr17 38720538 38720548 SP1 JASPAR yes 54226976
chr17 38720540 38720545 SP1 TRANSFAC yes 54226977
chr17 38720541 38720551 SREBF1 JASPAR yes 54226978
chr17 38720541 38720551 SREBF2 JASPAR yes 54226979
Genes associated with rs571250904[chr17:38720543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More