EnhancerDB
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  3. rs571287840[chr6:13425188]
Enhancers that have rs571287840[chr6:13425188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs571287840[chr6:13425188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13425179 13425200 IRF1 JASPAR yes 100029197
chr6 13425182 13425203 IRF1 JASPAR yes 100029198
chr6 13425183 13425204 IRF1 JASPAR yes 100029199
chr6 13425184 13425205 IRF1 JASPAR yes 100029200
chr6 13425185 13425200 FOXP1 JASPAR yes 100029201
chr6 13425185 13425206 IRF1 JASPAR yes 100029202
chr6 13425186 13425207 IRF1 JASPAR yes 100029203
chr6 13425187 13425202 FOXP1 JASPAR yes 100029204
chr6 13425187 13425208 IRF1 JASPAR yes 100029205
chr6 13425188 13425203 FOXP1 JASPAR yes 100029206
chr6 13425188 13425209 IRF1 JASPAR yes 100029207
Genes associated with rs571287840[chr6:13425188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More