EnhancerDB
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  3. rs571331686[chr1:95265133]
Enhancers that have rs571331686[chr1:95265133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95264854 95265185 vista2576
VISTA
Transcript factors that have rs571331686[chr1:95265133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95264968 95265182 TCF7L2 GTRD no Colon (HCT116) 107816024
chr1 95265035 95265526 SOX2 GTRD no Neural Stem Cells (H9) 107816025
chr1 95265130 95265144 POU4F1 JASPAR yes 30917722
chr1 95265130 95265144 POU4F1 JASPAR yes 118334223
chr1 95265130 95265146 POU4F3 JASPAR yes 30917723
chr1 95265130 95265146 POU4F3 JASPAR yes 118334224
chr1 95265133 95265137 YY1 TRANSFAC yes 30917724
chr1 95265133 95265137 YY1 TRANSFAC yes 118334225
Genes associated with rs571331686[chr1:95265133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More