EnhancerDB
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  3. rs571475725[chr2:39635268]
Enhancers that have rs571475725[chr2:39635268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs571475725[chr2:39635268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39635252 39635273 IRF1 JASPAR yes 73197567
chr2 39635256 39635268 IRF1 JASPAR yes 73197568
chr2 39635257 39635272 FOXP1 JASPAR yes 73197569
chr2 39635257 39635278 IRF1 JASPAR yes 73197570
chr2 39635258 39635279 IRF1 JASPAR yes 73197571
chr2 39635262 39635277 STAT2 JASPAR yes 73197572
chr2 39635264 39635285 IRF1 JASPAR yes 73197573
Genes associated with rs571475725[chr2:39635268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More