EnhancerDB
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  3. rs571502005[chr1:55030067]
Enhancers that have rs571502005[chr1:55030067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs571502005[chr1:55030067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55030058 55030077 CTCF JASPAR yes 28992889
chr1 55030059 55030070 TFAP2A JASPAR yes 28992890
chr1 55030059 55030070 TFAP2B JASPAR yes 28992891
chr1 55030059 55030071 TFAP2A JASPAR yes 28992892
chr1 55030059 55030071 TFAP2B JASPAR yes 28992893
chr1 55030059 55030071 TFAP2C JASPAR yes 28992894
chr1 55030059 55030072 TFAP2A JASPAR yes 28992895
chr1 55030059 55030072 TFAP2B JASPAR yes 28992896
chr1 55030059 55030072 TFAP2C JASPAR yes 28992897
chr1 55030059 55030074 ZIC3 JASPAR yes 28992898
chr1 55030059 55030074 ZIC4 JASPAR yes 28992899
chr1 55030060 55030074 GLIS2 JASPAR yes 28992900
chr1 55030060 55030074 ZIC1 JASPAR yes 28992901
chr1 55030066 55030076 SP1 JASPAR yes 28992902
chr1 55030067 55030077 SP1 JASPAR yes 28992903
Genes associated with rs571502005[chr1:55030067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More