EnhancerDB
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  3. rs571675477[chr16:85595968]
Enhancers that have rs571675477[chr16:85595968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs571675477[chr16:85595968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85595412 85596527 TCF7L2 GTRD no Colon (HCT116) 21729257
chr16 85595479 85596577 ZNF274 GTRD no Bone Marrow (K562) 21729258
chr16 85595813 85596478 ZNF143 GTRD no Epithelial (MCF-7) 21729259
chr16 85595817 85596540 ZNF143 GTRD no Epithelial (MCF-7) 21729260
chr16 85595840 85596320 TCF7L2 GTRD no Colon (HCT116) 21729261
chr16 85595960 85595970 SP1 JASPAR yes 12076788
chr16 85595961 85595971 ZNF740 JASPAR yes 12076789
Genes associated with rs571675477[chr16:85595968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More