EnhancerDB
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  3. rs571816426[chr2:38930229]
Enhancers that have rs571816426[chr2:38930229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs571816426[chr2:38930229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38930218 38930229 FOXB1 JASPAR yes 73167281
chr2 38930219 38930230 FOXB1 JASPAR yes 73167282
chr2 38930220 38930231 FOXB1 JASPAR yes 73167284
chr2 38930221 38930232 FOXB1 JASPAR yes 73167285
chr2 38930222 38930230 FOXL1 JASPAR yes 73167286
chr2 38930222 38930233 FOXB1 JASPAR yes 73167287
chr2 38930223 38930234 FOXB1 JASPAR yes 73167288
chr2 38930224 38930232 FOXL1 JASPAR yes 73167289
chr2 38930224 38930235 FOXB1 JASPAR yes 73167290
chr2 38930226 38930234 FOXL1 JASPAR yes 73167291
chr2 38930229 38930250 IRF1 JASPAR yes 73167292
Genes associated with rs571816426[chr2:38930229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More