EnhancerDB
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  3. rs572016974[chr1:204058434]
Enhancers that have rs572016974[chr1:204058434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572016974[chr1:204058434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 21370127
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 107859594
chr1 204057159 204058507 TCF7L2 GTRD no Colon (HCT116) 21370138
chr1 204057159 204058507 TCF7L2 GTRD no Colon (HCT116) 107859605
chr1 204057216 204058480 ZNF274 GTRD no Cervix (HeLa-S3) 21370142
chr1 204057216 204058480 ZNF274 GTRD no Cervix (HeLa-S3) 107859609
chr1 204057381 204058700 TCF7L2 GTRD no Colon (HCT116) 21370149
chr1 204057381 204058700 TCF7L2 GTRD no Colon (HCT116) 107859617
chr1 204058137 204058452 NR3C1 UCSC Txn Factor no Conserved 107859623
Genes associated with rs572016974[chr1:204058434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More