EnhancerDB
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  3. rs572030246[chr16:11429243]
Enhancers that have rs572030246[chr16:11429243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
Transcript factors that have rs572030246[chr16:11429243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11429226 11429247 IRF1 JASPAR yes 9507067
chr16 11429231 11429246 MEF2A JASPAR yes 9507072
chr16 11429232 11429247 FOXP1 JASPAR yes 9507073
chr16 11429232 11429247 MEF2C JASPAR yes 9507074
chr16 11429232 11429253 IRF1 JASPAR yes 9507075
chr16 11429233 11429245 FOXC2 JASPAR yes 9507076
chr16 11429233 11429245 MEF2A JASPAR yes 9507077
chr16 11429233 11429245 MEF2B JASPAR yes 9507078
chr16 11429233 11429245 MEF2D JASPAR yes 9507079
chr16 11429234 11429244 MEF2A JASPAR yes 9507080
chr16 11429236 11429248 IRF1 JASPAR yes 9507082
chr16 11429236 11429250 IRF7 JASPAR yes 9507083
chr16 11429238 11429253 FOXP1 JASPAR yes 9507084
chr16 11429239 11429251 FOXC2 JASPAR yes 9507085
chr16 11429240 11429251 FOXC1 JASPAR yes 9507086
chr16 11429240 11429261 IRF1 JASPAR yes 9507087
chr16 11429241 11429245 YY1 TRANSFAC yes 9507088
chr16 11429242 11429257 FOXP1 JASPAR yes 9507089
Genes associated with rs572030246[chr16:11429243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More