EnhancerDB
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  3. rs572050304[chr12:108708711]
Enhancers that have rs572050304[chr12:108708711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108689886 108710415 enh14968
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs572050304[chr12:108708711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108708705 108708726 IRF1 JASPAR yes 123591974
chr12 108708706 108708721 FOXP1 JASPAR yes 123591975
chr12 108708706 108708727 IRF1 JASPAR yes 123591976
chr12 108708707 108708718 FOXP2 JASPAR yes 123591977
chr12 108708707 108708728 IRF1 JASPAR yes 123591978
chr12 108708708 108708723 FOXP1 JASPAR yes 123591979
chr12 108708708 108708729 IRF1 JASPAR yes 123591980
chr12 108708709 108708730 IRF1 JASPAR yes 123591981
chr12 108708710 108708725 FOXP1 JASPAR yes 123591982
chr12 108708710 108708731 IRF1 JASPAR yes 123591983
chr12 108708711 108708726 FOXP1 JASPAR yes 123591984
chr12 108708711 108708732 IRF1 JASPAR yes 123591985
Genes associated with rs572050304[chr12:108708711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More