EnhancerDB
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  3. rs572052060[chr17:76340593]
Enhancers that have rs572052060[chr17:76340593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572052060[chr17:76340593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76340554 76340784 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793609
chr17 76340577 76340598 IRF1 JASPAR yes 56150222
chr17 76340578 76340593 FOXP1 JASPAR yes 56150223
chr17 76340578 76340599 IRF1 JASPAR yes 56150224
chr17 76340579 76340594 FOXP1 JASPAR yes 56150225
chr17 76340579 76340600 IRF1 JASPAR yes 56150226
chr17 76340580 76340595 FOXP1 JASPAR yes 56150227
chr17 76340580 76340601 IRF1 JASPAR yes 56150228
chr17 76340581 76340596 FOXP1 JASPAR yes 56150229
chr17 76340581 76340602 IRF1 JASPAR yes 56150230
chr17 76340582 76340597 FOXP1 JASPAR yes 56150231
chr17 76340584 76340599 FOXP1 JASPAR yes 56150232
chr17 76340585 76340606 IRF1 JASPAR yes 56150233
chr17 76340586 76340601 FOXP1 JASPAR yes 56150234
chr17 76340589 76340603 SPIC JASPAR yes 56150235
chr17 76340589 76340604 PRDM1 JASPAR yes 56150236
Genes associated with rs572052060[chr17:76340593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More