EnhancerDB
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  3. rs572084987[chr17:38687233]
Enhancers that have rs572084987[chr17:38687233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572084987[chr17:38687233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38687115 38687896 ZNF274 GTRD no Bone Marrow (K562) 21754991
chr17 38687219 38687233 PLAG1 JASPAR yes 54222358
chr17 38687224 38687236 E2F8 JASPAR yes 54222359
chr17 38687227 38687241 PLAG1 JASPAR yes 54222360
chr17 38687228 38687238 SP1 JASPAR yes 54222361
chr17 38687229 38687239 SP1 JASPAR yes 54222362
chr17 38687230 38687234 LFA1 TRANSFAC yes 54222363
Genes associated with rs572084987[chr17:38687233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More