EnhancerDB
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  3. rs572104538[chr3:119867497]
Enhancers that have rs572104538[chr3:119867497]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs572104538[chr3:119867497]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119867486 119867501 RUNX2 JASPAR yes 5196703
chr3 119867490 119867500 RUNX3 JASPAR yes 5196704
chr3 119867490 119867502 IRF1 JASPAR yes 5196705
chr3 119867491 119867500 RUNX2 JASPAR yes 5196706
Genes associated with rs572104538[chr3:119867497], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More