EnhancerDB
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  3. rs572149176[chr17:27964809]
Enhancers that have rs572149176[chr17:27964809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572149176[chr17:27964809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27964798 27964813 FOXP1 JASPAR yes 53744025
chr17 27964798 27964819 IRF1 JASPAR yes 53744026
chr17 27964799 27964820 IRF1 JASPAR yes 53744027
chr17 27964800 27964812 FOXC2 JASPAR yes 53744028
chr17 27964802 27964817 FOXP1 JASPAR yes 53744029
chr17 27964805 27964826 IRF1 JASPAR yes 53744030
chr17 27964808 27964814 TBP TRANSFAC yes 53744031
Genes associated with rs572149176[chr17:27964809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More