EnhancerDB
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  3. rs572168663[chr2:38918881]
Enhancers that have rs572168663[chr2:38918881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs572168663[chr2:38918881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38918860 38918881 IRF1 JASPAR yes 73165160
chr2 38918866 38918881 FOXP1 JASPAR yes 73165163
chr2 38918867 38918882 FOXP1 JASPAR yes 73165164
chr2 38918868 38918883 FOXP1 JASPAR yes 73165165
chr2 38918869 38918884 FOXP1 JASPAR yes 73165166
chr2 38918871 38918886 MEF2C JASPAR yes 73165167
chr2 38918880 38918886 TBP TRANSFAC yes 73165168
Genes associated with rs572168663[chr2:38918881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More