EnhancerDB
  1. Home
  2. SNP
  3. rs572176754[chr16:87819835]
Enhancers that have rs572176754[chr16:87819835]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572176754[chr16:87819835]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87819271 87820363 TCF7L2 GTRD no Colon (HCT116) 21734478
chr16 87819299 87820474 ZNF143 GTRD no Epithelial (MCF-7) 21734479
chr16 87819316 87820447 TCF7L2 GTRD no Colon (HCT116) 21734480
chr16 87819368 87820352 TCF7L2 GTRD no Colon (HCT116) 21734481
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220354
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220355
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220356
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220357
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220358
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220359
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220360
chr16 87819824 87819835 FOSL2 JASPAR yes 12239251
chr16 87819829 87819840 USF1 JASPAR yes 12239255
chr16 87819829 87819840 USF2 JASPAR yes 12239256
chr16 87819830 87819837 USF2 TRANSFAC yes 12239257
chr16 87819830 87819840 SREBF2 JASPAR yes 12239258
chr16 87819832 87819837 USF2 TRANSFAC yes 12239259
chr16 87819835 87819848 NR2F1 JASPAR yes 12239260
Genes associated with rs572176754[chr16:87819835], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More