EnhancerDB
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  3. rs572208809[chr17:4740628]
Enhancers that have rs572208809[chr17:4740628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4739171 4760073 enh16944
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572208809[chr17:4740628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4740621 4740633 HES5 JASPAR yes 52856676
chr17 4740621 4740633 HES7 JASPAR yes 52856677
chr17 4740622 4740632 BHLHE40 JASPAR yes 52856678
chr17 4740622 4740632 BHLHE41 JASPAR yes 52856679
chr17 4740622 4740632 CLOCK JASPAR yes 52856680
chr17 4740622 4740632 HEY1 JASPAR yes 52856681
chr17 4740622 4740632 HEY2 JASPAR yes 52856682
chr17 4740622 4740632 MAX JASPAR yes 52856683
chr17 4740622 4740632 MLXIPL JASPAR yes 52856684
chr17 4740622 4740632 MLX JASPAR yes 52856685
chr17 4740622 4740632 MNT JASPAR yes 52856686
chr17 4740622 4740632 TFE3 JASPAR yes 52856687
chr17 4740622 4740632 TFEB JASPAR yes 52856688
chr17 4740622 4740632 TFEC JASPAR yes 52856689
chr17 4740624 4740629 MYC TRANSFAC yes 52856690
chr17 4740624 4740629 USF1 TRANSFAC yes 52856691
chr17 4740624 4740629 USF2 TRANSFAC yes 52856692
Genes associated with rs572208809[chr17:4740628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More