EnhancerDB
  1. Home
  2. SNP
  3. rs572227149[chr19:2542752]
Enhancers that have rs572227149[chr19:2542752]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572227149[chr19:2542752]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 21836487
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 108361549
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 21836489
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 108361551
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 21836490
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 108361553
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 21836499
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361562
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361563
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361564
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 21836500
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361565
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361566
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361567
chr19 2541769 2544238 ZNF274 GTRD no Blood (GM12878) 108361847
chr19 2541769 2544238 ZNF274 GTRD no Blood (GM12878) 108361848
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 21836754
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 108361849
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 108361850
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 21836755
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 108361851
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 108361852
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 21836756
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 108361853
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 108361854
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 21836757
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 108361855
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 108361856
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 21836758
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 108361857
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 108361858
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 21836759
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 108361859
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 108361860
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 21836760
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 108361861
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 108361862
chr19 2542752 2542766 GLIS2 JASPAR yes 112072099
chr19 2542752 2542766 GLIS3 JASPAR yes 112072100
chr19 2542752 2542766 ZIC1 JASPAR yes 112072101
chr19 2542752 2542767 ZIC3 JASPAR yes 112072102
chr19 2542752 2542767 ZIC4 JASPAR yes 112072103
Genes associated with rs572227149[chr19:2542752], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More