EnhancerDB
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  3. rs57235716[chr17:39060554]
Enhancers that have rs57235716[chr17:39060554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs57235716[chr17:39060554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39060513 39060789 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757158
chr17 39060528 39060768 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757159
chr17 39060545 39060557 ZBTB7A JASPAR yes 54242347
chr17 39060549 39060563 PLAG1 JASPAR yes 54242349
Genes associated with rs57235716[chr17:39060554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More