EnhancerDB
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  3. rs572414517[chr1:203477938]
Enhancers that have rs572414517[chr1:203477938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572414517[chr1:203477938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203477750 203477940 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369000
chr1 203477932 203477938 SOX10 JASPAR yes 34633268
chr1 203477938 203477953 HNF4A JASPAR yes 34633269
Genes associated with rs572414517[chr1:203477938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More